IL_4Z3S_338

3D structure

PDB id

4Z3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

GAUG*CUAAUC

Length

10 nucleotides

Bulged bases

4Z3S|1|2a|U|1257, 4Z3S|1|2a|A|1280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4Z3S_338 not in the Motif Atlas

Homologous match to IL_6CZR_161

Geometric discrepancy: 0.4097

The information below is about IL_6CZR_161

Detailed Annotation

180 degree turn

Broad Annotation

No text annotation

Motif group

IL_11344.1

Basepair signature

cWW-cSS-L-R-cWW

Number of instances in this motif group

3

Unit IDs

4Z3S|1|2a|G|1255
4Z3S|1|2a|A|1256
4Z3S|1|2a|U|1257
4Z3S|1|2a|G|1258
*
4Z3S|1|2a|C|1277
4Z3S|1|2a|U|1278
4Z3S|1|2a|A|1279
4Z3S|1|2a|A|1280
4Z3S|1|2a|U|1281
4Z3S|1|2a|C|1282

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2c

30S ribosomal protein S3

Chain 2j

30S ribosomal protein S10

Chain 2n

30S ribosomal protein S14 type Z