IL_5ADY_049

3D structure

PDB id

5ADY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with HflX

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

GUUG*CAUC

Length

8 nucleotides

Bulged bases

5ADY|1|B|U|1061

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5ADY_049 not in the Motif Atlas

Homologous match to IL_6PRV_001

Geometric discrepancy: 0.4368

The information below is about IL_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28482.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

4

Unit IDs

5ADY|1|B|G|1059
5ADY|1|B|U|1060
5ADY|1|B|U|1061
5ADY|1|B|G|1062
*
5ADY|1|B|C|1076
5ADY|1|B|A|1077
5ADY|1|B|U|1078
5ADY|1|B|C|1079

Current chains

Chain B

23S RRNA

Nearby chains

Chain I

50S RIBOSOMAL PROTEIN L11