IL_5ADY_119
3D structure
- PDB id
- 5ADY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with HflX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- UCACUG*UAAA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5ADY_119 not in the Motif Atlas
- Geometric match to IL_4V88_408
- Geometric discrepancy: 0.3108
- The information below is about IL_4V88_408
- Detailed Annotation
- C-loop with extra cWW pair
- Broad Annotation
- C-loop
- Motif group
- IL_11347.2
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
5ADY|1|B|U|2680
5ADY|1|B|C|2681
5ADY|1|B|A|2682
5ADY|1|B|C|2683
5ADY|1|B|U|2684
5ADY|1|B|G|2685
*
5ADY|1|B|U|2724
5ADY|1|B|A|2725
5ADY|1|B|A|2726
5ADY|1|B|A|2727
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain D
- 50S RIBOSOMAL PROTEIN L3
- Chain K
- 50S RIBOSOMAL PROTEIN L14
- Chain N
- 50S RIBOSOMAL PROTEIN L17
- Chain P
- 50S RIBOSOMAL PROTEIN L19
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