IL_5AJ0_009

3D structure

PDB id

5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo electron microscopy of actively translating human polysomes (POST state).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCC*GC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_02315.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

103

Unit IDs

5AJ0|1|A2|G|127
5AJ0|1|A2|C|128
5AJ0|1|A2|C|129
*
5AJ0|1|A2|G|139
5AJ0|1|A2|C|140

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AG

60S ribosomal protein L7a

Chain AN

60S ribosomal protein L15

Chain AX

60S ribosomal protein L23a

Chain Ah

60S ribosomal protein L35