IL_5AJ0_019

3D structure

PDB id

5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo electron microscopy of actively translating human polysomes (POST state).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGUC*GCUAC

Length

9 nucleotides

Bulged bases

5AJ0|1|A2|A|1286

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68658.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

116

Unit IDs

5AJ0|1|A2|G|437
5AJ0|1|A2|G|438
5AJ0|1|A2|U|439
5AJ0|1|A2|C|440
*
5AJ0|1|A2|G|1283
5AJ0|1|A2|C|1284
5AJ0|1|A2|U|1285
5AJ0|1|A2|A|1286
5AJ0|1|A2|C|1287

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain A3

5.8S ribosomal RNA; 5.8S rRNA

Chain Ae

60S ribosomal protein L32

Chain Af

60S ribosomal protein L35a