IL_5AJ0_071
3D structure
- PDB id
- 5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo electron microscopy of actively translating human polysomes (POST state).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGGUAA*UAAAUG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_24236.1
- Basepair signature
- cWW-bif-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
5AJ0|1|A2|C|1714
5AJ0|1|A2|G|1715
5AJ0|1|A2|G|1716
5AJ0|1|A2|U|1717
5AJ0|1|A2|A|1718
5AJ0|1|A2|A|1719
*
5AJ0|1|A2|U|1774
5AJ0|1|A2|A|1775
5AJ0|1|A2|A|1776
5AJ0|1|A2|A|1777
5AJ0|1|A2|U|1778
5AJ0|1|A2|G|1779
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain A4
- 5S ribosomal RNA; 5S rRNA
- Chain AD
- 60S ribosomal protein L5
- Chain AF
- 60S ribosomal protein L7
- Chain AI
- 60S ribosomal protein L10
- Chain AT
- 60S ribosomal protein L21
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