IL_5AJ0_107
3D structure
- PDB id
- 5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo electron microscopy of actively translating human polysomes (POST state).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGA*UCC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: GGA,UCC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5AJ0_107 not in the Motif Atlas
- Geometric match to IL_4LFB_061
- Geometric discrepancy: 0.1181
- The information below is about IL_4LFB_061
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_86319.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 269
Unit IDs
5AJ0|1|A2|G|2575
5AJ0|1|A2|G|2576
5AJ0|1|A2|A|2577
*
5AJ0|1|A2|U|2726
5AJ0|1|A2|C|2727
5AJ0|1|A2|C|2728
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AA
- 60S ribosomal protein L8
- Chain Ag
- 60S ribosomal protein L34
Coloring options: