IL_5AJ0_162

3D structure

PDB id

5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo electron microscopy of actively translating human polysomes (POST state).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

ACAUUU*ACCAU

Length

11 nucleotides

Bulged bases

5AJ0|1|A2|C|4632

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_52470.1

Basepair signature

cWW-L-L-L-tHS-cWW

Number of instances in this motif group

7

Unit IDs

5AJ0|1|A2|A|4586
5AJ0|1|A2|C|4587
5AJ0|1|A2|A|4588
5AJ0|1|A2|U|4589
5AJ0|1|A2|U|4590
5AJ0|1|A2|U|4591
*
5AJ0|1|A2|A|4631
5AJ0|1|A2|C|4632
5AJ0|1|A2|C|4633
5AJ0|1|A2|A|4634
5AJ0|1|A2|U|4635

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AB

60S ribosomal protein L3

Chain AV

60S ribosomal protein L23

Chain AW

60S ribosomal protein L24