IL_5AJ0_211
3D structure
- PDB id
- 5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo electron microscopy of actively translating human polysomes (POST state).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGG*CGAUUC
- Length
- 9 nucleotides
- Bulged bases
- 5AJ0|1|B1|U|428
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5AJ0_211 not in the Motif Atlas
- Homologous match to IL_4V88_404
- Geometric discrepancy: 0.1596
- The information below is about IL_4V88_404
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_11347.3
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
5AJ0|1|B1|G|411
5AJ0|1|B1|G|412
5AJ0|1|B1|G|413
*
5AJ0|1|B1|C|424
5AJ0|1|B1|G|425
5AJ0|1|B1|A|426
5AJ0|1|B1|U|427
5AJ0|1|B1|U|428
5AJ0|1|B1|C|429
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BE
- 40S ribosomal protein S4, Y isoform 1
- Chain BJ
- 40S ribosomal protein S9
- Chain BX
- 40S ribosomal protein S23
Coloring options: