IL_5AN9_009

3D structure

PDB id

5AN9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanism of eIF6 release from the nascent 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUAAUAG*CUAGCAG

Length

14 nucleotides

Bulged bases

5AN9|1|N|G|1552, 5AN9|1|N|A|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_76337.1

Basepair signature

cWW-tWW-cSH-L-tWW-tWW-cSH-cWW

Number of instances in this motif group

6

Unit IDs

5AN9|1|N|C|1423
5AN9|1|N|U|1424
5AN9|1|N|A|1425
5AN9|1|N|A|1426
5AN9|1|N|U|1427
5AN9|1|N|A|1428
5AN9|1|N|G|1429
*
5AN9|1|N|C|1549
5AN9|1|N|U|1550
5AN9|1|N|A|1551
5AN9|1|N|G|1552
5AN9|1|N|C|1553
5AN9|1|N|A|1554
5AN9|1|N|G|1555

Current chains

Chain N

26S RIBOSOMAL RNA

Nearby chains

Chain B

60S RIBOSOMAL PROTEIN L9

Chain H

UBIQUITIN-60S RIBOSOMAL PROTEIN L40