IL_5DAT_066
3D structure
- PDB id
- 5DAT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of yeast 80S ribosome with hypusine-containing eIF5A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- UCUUC*GGAAUA
- Length
- 11 nucleotides
- Bulged bases
- 5DAT|1|1|U|1629
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5DAT_066 not in the Motif Atlas
- Homologous match to IL_8C3A_072
- Geometric discrepancy: 0.1529
- The information below is about IL_8C3A_072
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_48431.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
5DAT|1|1|U|1627
5DAT|1|1|C|1628
5DAT|1|1|U|1629
5DAT|1|1|U|1630
5DAT|1|1|C|1631
*
5DAT|1|1|G|1811
5DAT|1|1|G|1812
5DAT|1|1|A|1813
5DAT|1|1|A|1814
5DAT|1|1|U|1815
5DAT|1|1|A|1816
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain N7
- 60S ribosomal protein L27-A
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