IL_8C3A_072

3D structure

PDB id

8C3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ailanthone bound to the Candida albicans 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UCUUC*GGAAUA

Length

11 nucleotides

Bulged bases

8C3A|1|1|U|1625

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_48431.1

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

8C3A|1|1|U|1623
8C3A|1|1|C|1624
8C3A|1|1|U|1625
8C3A|1|1|U|1626
8C3A|1|1|C|1627
*
8C3A|1|1|G|1807
8C3A|1|1|G|1808
8C3A|1|1|A|1809
8C3A|1|1|A|1810
8C3A|1|1|U|1811
8C3A|1|1|A|1812

Current chains

Chain 1

25S

Nearby chains

Chain AA

60S ribosomal protein L27