IL_5E7K_075

3D structure

PDB id

5E7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGAAU*AUAG

Length

9 nucleotides

Bulged bases

5E7K|1|14|A|283

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5E7K_075 not in the Motif Atlas

Homologous match to IL_9DFE_009

Geometric discrepancy: 0.1922

The information below is about IL_9DFE_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

5E7K|1|14|C|280
5E7K|1|14|G|281
5E7K|1|14|A|282
5E7K|1|14|A|283
5E7K|1|14|U|284
*
5E7K|1|14|A|357
5E7K|1|14|U|358
5E7K|1|14|A|359
5E7K|1|14|G|360

Current chains

Chain 14

23S rRNA

Nearby chains