IL_5E7K_191

3D structure

PDB id

5E7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

ACCC*GUU

Length

7 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5E7K_191 not in the Motif Atlas

Geometric match to IL_8E0F_001

Geometric discrepancy: 0.3821

The information below is about IL_8E0F_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_09990.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

4

Unit IDs

5E7K|1|1G|A|185
5E7K|1|1G|C|186
5E7K|1|1G|C|186|||A
5E7K|1|1G|C|186|||B
*
5E7K|1|1G|G|191|||E
5E7K|1|1G|U|191|||F
5E7K|1|1G|U|192

Current chains

Chain 1G

16S rRNA

Nearby chains

Chain BA

30S ribosomal protein S20