IL_5FCI_301
3D structure
- PDB id
- 5FCI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant uL3 W255C mutant 80S yeast ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GUGGC*GAAUC
- Length
- 10 nucleotides
- Bulged bases
- 5FCI|1|5|G|1236
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5FCI_301 not in the Motif Atlas
- Homologous match to IL_8P9A_283
- Geometric discrepancy: 0.1269
- The information below is about IL_8P9A_283
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_16218.2
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
5FCI|1|5|G|1234
5FCI|1|5|U|1235
5FCI|1|5|G|1236
5FCI|1|5|G|1237
5FCI|1|5|C|1238
*
5FCI|1|5|G|1250
5FCI|1|5|A|1251
5FCI|1|5|A|1252
5FCI|1|5|U|1253
5FCI|1|5|C|1254
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain m2
- 60S ribosomal protein L12-A (uL11)
- Chain p0
- 60S acidic ribosomal protein P0
Coloring options: