IL_8P9A_283

3D structure

PDB id

8P9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Methyllissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GUGGC*GAAUC

Length

10 nucleotides

Bulged bases

8P9A|1|AR|G|1236

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_16218.2

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

3

Unit IDs

8P9A|1|AR|G|1234
8P9A|1|AR|U|1235
8P9A|1|AR|G|1236
8P9A|1|AR|G|1237
8P9A|1|AR|C|1238
*
8P9A|1|AR|G|1250
8P9A|1|AR|A|1251
8P9A|1|AR|A|1252
8P9A|1|AR|U|1253
8P9A|1|AR|C|1254

Current chains

Chain AR

25S ribosomal RNA

Nearby chains

Chain p0

60S acidic ribosomal protein P0