IL_5FCJ_188
3D structure
- PDB id
- 5FCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGGGG*CAAG
- Length
- 9 nucleotides
- Bulged bases
- 5FCJ|1|2|G|876
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5FCJ_188 not in the Motif Atlas
- Homologous match to IL_8P9A_420
- Geometric discrepancy: 0.1022
- The information below is about IL_8P9A_420
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 39
Unit IDs
5FCJ|1|2|C|874
5FCJ|1|2|G|875
5FCJ|1|2|G|876
5FCJ|1|2|G|877
5FCJ|1|2|G|878
*
5FCJ|1|2|C|950
5FCJ|1|2|A|951
5FCJ|1|2|A|952
5FCJ|1|2|G|953
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain C3
- 40S ribosomal protein S13
- Chain D6
- 40S ribosomal protein S26-B
- Chain O0
- 60S ribosomal protein L30
- Chain S1
- 40S ribosomal protein S1-A
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