IL_5FCJ_369

3D structure

PDB id

5FCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UUUUUG*CGAAG

Length

11 nucleotides

Bulged bases

5FCJ|1|5|U|3056, 5FCJ|1|5|U|3058

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5FCJ_369 not in the Motif Atlas

Homologous match to IL_8P9A_346

Geometric discrepancy: 0.0602

The information below is about IL_8P9A_346

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_98200.1

Basepair signature

cWW-L-R-tHW-L-cWW

Number of instances in this motif group

3

Unit IDs

5FCJ|1|5|U|3054
5FCJ|1|5|U|3055
5FCJ|1|5|U|3056
5FCJ|1|5|U|3057
5FCJ|1|5|U|3058
5FCJ|1|5|G|3059
*
5FCJ|1|5|C|3084
5FCJ|1|5|G|3085
5FCJ|1|5|A|3086
5FCJ|1|5|A|3087
5FCJ|1|5|G|3088

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain l3

60S ribosomal protein L3

Chain n4

60S ribosomal protein L24-A

Chain o1

60S ribosomal protein L31-A