IL_5GAE_122
3D structure
- PDB id
- 5GAE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RNC in complex with a translocating SecYEG
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- GAU*GC
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5GAE_122 not in the Motif Atlas
- Geometric match to IL_8C3A_012
- Geometric discrepancy: 0.2321
- The information below is about IL_8C3A_012
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_05035.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 38
Unit IDs
5GAE|1|A|G|1031
5GAE|1|A|A|1032
5GAE|1|A|U|1033
*
5GAE|1|A|G|1122
5GAE|1|A|C|1123
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain N
- 50S ribosomal protein L16
- Chain f
- 50S ribosomal protein L36
Coloring options: