IL_5IMQ_109

3D structure

PDB id

5IMQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 3.8 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUCAAG*CGAAGC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMQ|1|D|G|1850
5IMQ|1|D|U|1851
5IMQ|1|D|C|1852
5IMQ|1|D|A|1853
5IMQ|1|D|A|1854
5IMQ|1|D|G|1855
*
5IMQ|1|D|C|1887
5IMQ|1|D|G|1888
5IMQ|1|D|A|1889
5IMQ|1|D|A|1890
5IMQ|1|D|G|1891
5IMQ|1|D|C|1892

Current chains

Chain D

23S ribosomal RNA

Nearby chains

Chain 5

Transfer RNA; tRNA

Chain a

50S ribosomal protein L2