IL_5IMR_043
3D structure
- PDB id
- 5IMR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome bound to cofactor at 5.7 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.7 Å
Loop
- Sequence
- CG*CUG
- Length
- 5 nucleotides
- Bulged bases
- 5IMR|1|A|U|1196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5IMR_043 not in the Motif Atlas
- Homologous match to IL_6CZR_156
- Geometric discrepancy: 0.2349
- The information below is about IL_6CZR_156
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
5IMR|1|A|C|1060
5IMR|1|A|G|1061
*
5IMR|1|A|C|1195
5IMR|1|A|U|1196
5IMR|1|A|G|1197
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain G
- 30S ribosomal protein S3
- Chain I
- 30S ribosomal protein S5
- Chain M
- 30S ribosomal protein S9
- Chain N
- 30S ribosomal protein S10
- Chain R
- 30S ribosomal protein S14 type Z
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