IL_5IMR_052
3D structure
- PDB id
- 5IMR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome bound to cofactor at 5.7 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.7 Å
Loop
- Sequence
- CGGGAG*CAG
- Length
- 9 nucleotides
- Bulged bases
- 5IMR|1|A|G|1443
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5IMR_052 not in the Motif Atlas
- Homologous match to IL_4LFB_064
- Geometric discrepancy: 0.353
- The information below is about IL_4LFB_064
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49061.1
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 6
Unit IDs
5IMR|1|A|C|1440
5IMR|1|A|G|1441
5IMR|1|A|G|1442
5IMR|1|A|G|1443
5IMR|1|A|A|1446
5IMR|1|A|G|1447
*
5IMR|1|A|C|1459
5IMR|1|A|A|1460
5IMR|1|A|G|1461
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain D
- Large subunit ribosomal RNA; LSU rRNA
- Chain X
- 30S ribosomal protein S20
- Chain l
- 50S ribosomal protein L19
Coloring options: