IL_5IMR_087
3D structure
- PDB id
- 5IMR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome bound to cofactor at 5.7 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.7 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 5IMR|1|D|A|1379
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5IMR_087 not in the Motif Atlas
- Homologous match to IL_7RQB_052
- Geometric discrepancy: 0.306
- The information below is about IL_7RQB_052
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
5IMR|1|D|C|1351
5IMR|1|D|U|1352
5IMR|1|D|A|1353
5IMR|1|D|A|1354
5IMR|1|D|G|1355
*
5IMR|1|D|C|1376
5IMR|1|D|G|1377
5IMR|1|D|A|1378
5IMR|1|D|A|1379
5IMR|1|D|G|1380
Current chains
- Chain D
- 23S ribosomal RNA
Nearby chains
- Chain a
- 50S ribosomal protein L2
- Chain y
- 50S ribosomal protein L34
Coloring options: