IL_5IMR_105
3D structure
- PDB id
- 5IMR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome bound to cofactor at 5.7 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.7 Å
Loop
- Sequence
- GGCC*GUC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5IMR_105 not in the Motif Atlas
- Geometric match to IL_5TBW_064
- Geometric discrepancy: 0.3499
- The information below is about IL_5TBW_064
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_15698.1
- Basepair signature
- cWW-tSH-cSH-cWW
- Number of instances in this motif group
- 9
Unit IDs
5IMR|1|D|G|1906
5IMR|1|D|G|1907
5IMR|1|D|C|1908
5IMR|1|D|C|1909
*
5IMR|1|D|G|1922
5IMR|1|D|U|1923
5IMR|1|D|C|1924
Current chains
- Chain D
- 23S ribosomal RNA
Nearby chains
- Chain 4
- Transfer RNA; tRNA
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: