IL_5IMR_132
3D structure
- PDB id
- 5IMR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome bound to cofactor at 5.7 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.7 Å
Loop
- Sequence
- GGG*CGAC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5IMR_132 not in the Motif Atlas
- Homologous match to IL_7A0S_100
- Geometric discrepancy: 0.2847
- The information below is about IL_7A0S_100
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_31531.3
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 13
Unit IDs
5IMR|1|D|G|2843
5IMR|1|D|G|2844
5IMR|1|D|G|2845
*
5IMR|1|D|C|2871
5IMR|1|D|G|2872
5IMR|1|D|A|2873
5IMR|1|D|C|2874
Current chains
- Chain D
- 23S ribosomal RNA
Nearby chains
- Chain b
- 50S ribosomal protein L3
- Chain j
- 50S ribosomal protein L17
- Chain l
- 50S ribosomal protein L19
Coloring options: