IL_5IMR_135
3D structure
- PDB id
- 5IMR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome bound to cofactor at 5.7 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.7 Å
Loop
- Sequence
- GGAACC*GAAAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5IMR_135 not in the Motif Atlas
- Homologous match to IL_5J7L_356
- Geometric discrepancy: 0.2862
- The information below is about IL_5J7L_356
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_18472.4
- Basepair signature
- cWW-tSW-R-L-R-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
5IMR|1|E|G|23
5IMR|1|E|G|24
5IMR|1|E|A|25
5IMR|1|E|A|26
5IMR|1|E|C|27
5IMR|1|E|C|28
*
5IMR|1|E|G|56
5IMR|1|E|A|57
5IMR|1|E|A|58
5IMR|1|E|A|59
5IMR|1|E|C|60
Current chains
- Chain E
- 5S ribosomal RNA
Nearby chains
- Chain d
- 50S ribosomal protein L5
- Chain k
- 50S ribosomal protein L18
Coloring options: