IL_5J3C_022
3D structure
- PDB id
- 5J3C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermus thermophilus 70S termination complex containing E. coli RF1
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.04 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 5J3C|1|QA|A|572
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5J3C_022 not in the Motif Atlas
- Homologous match to IL_4LFB_022
- Geometric discrepancy: 0.0813
- The information below is about IL_4LFB_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.6
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 4
Unit IDs
5J3C|1|QA|C|569
5J3C|1|QA|G|570
5J3C|1|QA|U|571
5J3C|1|QA|A|572
5J3C|1|QA|A|573
5J3C|1|QA|A|574
5J3C|1|QA|G|575
*
5J3C|1|QA|C|880
5J3C|1|QA|G|881
Current chains
- Chain QA
- 16S rRNA
Nearby chains
- Chain QE
- 30S ribosomal protein S5
- Chain QL
- 30S ribosomal protein S12
- Chain QQ
- 30S ribosomal protein S17
Coloring options: