IL_5J7L_167
3D structure
- PDB id
- 5J7L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GAUG*CGC
- Length
- 7 nucleotides
- Bulged bases
- 5J7L|1|CA|U|1033
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5J7L_167 not in the Motif Atlas
- Homologous match to IL_5J7L_282
- Geometric discrepancy: 0.0442
- The information below is about IL_5J7L_282
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_57744.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 22
Unit IDs
5J7L|1|CA|G|1031
5J7L|1|CA|A|1032
5J7L|1|CA|U|1033
5J7L|1|CA|G|1034
*
5J7L|1|CA|C|1121
5J7L|1|CA|G|1122
5J7L|1|CA|C|1123
Current chains
- Chain CA
- 23S rRNA
Nearby chains
- Chain C5
- 50S ribosomal protein L36
- Chain CB
- 5S ribosomal RNA; 5S rRNA
- Chain CN
- 50S ribosomal protein L16
Coloring options: