IL_5KPS_036
3D structure
- PDB id
- 5KPS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGGAG*UC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5KPS_036 not in the Motif Atlas
- Homologous match to IL_5J7L_036
- Geometric discrepancy: 0.1178
- The information below is about IL_5J7L_036
- Detailed Annotation
- Left turn
- Broad Annotation
- Left turn
- Motif group
- IL_29346.2
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
5KPS|1|27|G|774
5KPS|1|27|G|775
5KPS|1|27|G|776
5KPS|1|27|A|777
5KPS|1|27|G|778
*
5KPS|1|27|U|804
5KPS|1|27|C|805
Current chains
- Chain 27
- 16S ribosomal RNA
Nearby chains
- Chain 16
- 30S ribosomal protein S11
- Chain 26
- 30S ribosomal protein S21
- Chain 28
- Large subunit ribosomal RNA; LSU rRNA
- Chain B
- 50S ribosomal protein L2
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