IL_5L3P_137
3D structure
- PDB id
- 5L3P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUGUAG*CGUAGAGAU
- Length
- 15 nucleotides
- Bulged bases
- 5L3P|1|a|A|702
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5L3P_137 not in the Motif Atlas
- Homologous match to IL_4LFB_031
- Geometric discrepancy: 0.1704
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
5L3P|1|a|G|683
5L3P|1|a|U|684
5L3P|1|a|G|685
5L3P|1|a|U|686
5L3P|1|a|A|687
5L3P|1|a|G|688
*
5L3P|1|a|C|699
5L3P|1|a|G|700
5L3P|1|a|U|701
5L3P|1|a|A|702
5L3P|1|a|G|703
5L3P|1|a|A|704
5L3P|1|a|G|705
5L3P|1|a|A|706
5L3P|1|a|U|707
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain k
- 30S ribosomal protein S11
Coloring options: