IL_5L3P_143
3D structure
- PDB id
- 5L3P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GCAC*GUUCCC
- Length
- 10 nucleotides
- Bulged bases
- 5L3P|1|a|C|934
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5L3P_143 not in the Motif Atlas
- Homologous match to IL_6CZR_149
- Geometric discrepancy: 0.232
- The information below is about IL_6CZR_149
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93211.1
- Basepair signature
- cWW-cWS-cWW-L-R-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
5L3P|1|a|G|933
5L3P|1|a|C|934
5L3P|1|a|A|935
5L3P|1|a|C|936
*
5L3P|1|a|G|1379
5L3P|1|a|U|1380
5L3P|1|a|U|1381
5L3P|1|a|C|1382
5L3P|1|a|C|1383
5L3P|1|a|C|1384
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain g
- 30S ribosomal protein S7
- Chain i
- 30S ribosomal protein S9
- Chain v
- mRNA
- Chain x
- Transfer RNA; tRNA
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