IL_5LKS_071
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CAGG*CCGUGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LKS_071 not in the Motif Atlas
- Geometric match to IL_3NPQ_006
- Geometric discrepancy: 0.3581
- The information below is about IL_3NPQ_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65740.1
- Basepair signature
- cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
5LKS|1|L5|C|4243
5LKS|1|L5|A|4244
5LKS|1|L5|G|4245
5LKS|1|L5|G|4246
*
5LKS|1|L5|C|4262
5LKS|1|L5|C|4263
5LKS|1|L5|G|4264
5LKS|1|L5|U|4265
5LKS|1|L5|G|4266
5LKS|1|L5|G|4267
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain L7
- 5S ribosomal RNA; 5S rRNA
- Chain LD
- 60S ribosomal protein L5
- Chain LJ
- 60S ribosomal protein L11
- Chain LT
- 60S ribosomal protein L21
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