IL_5LKS_072
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUUGA*UACAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LKS_072 not in the Motif Atlas
- Geometric match to IL_5TBW_121
- Geometric discrepancy: 0.2999
- The information below is about IL_5TBW_121
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
5LKS|1|L5|C|4294
5LKS|1|L5|U|4295
5LKS|1|L5|U|4296
5LKS|1|L5|G|4297
5LKS|1|L5|A|4298
*
5LKS|1|L5|U|4312
5LKS|1|L5|A|4313
5LKS|1|L5|C|4314
5LKS|1|L5|A|4315
5LKS|1|L5|G|4316
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LD
- 60S ribosomal protein L5
- Chain LQ
- 60S ribosomal protein L18
- Chain LT
- 60S ribosomal protein L21
- Chain Lb
- Ribosomal protein L29, isoform CRA_a
- Chain Lo
- 60S ribosomal protein L36a
Coloring options: