IL_5LL6_077
3D structure
- PDB id
- 5LL6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 40S ABCE1 post-splitting complex in ribosome recycling and translation initiation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGAU*GCAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LL6_077 not in the Motif Atlas
- Homologous match to IL_8CRE_440
- Geometric discrepancy: 0.247
- The information below is about IL_8CRE_440
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
5LL6|1|2|G|1041
5LL6|1|2|G|1042
5LL6|1|2|A|1043
5LL6|1|2|U|1044
*
5LL6|1|2|G|1074
5LL6|1|2|C|1075
5LL6|1|2|A|1076
5LL6|1|2|C|1077
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain P
- 40S ribosomal protein S0-A
- Chain Q
- 40S ribosomal protein S1-A
- Chain Y
- 40S ribosomal protein S13
- Chain e
- 40S ribosomal protein S26-A
- Chain f
- 40S ribosomal protein S27-A
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