IL_5LMU_021
3D structure
- PDB id
- 5LMU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of bacterial 30S-IF3-mRNA-tRNA translation pre-initiation complex, closed form (state-4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 5LMU|1|A|A|532, 5LMU|1|A|U|534, 5LMU|1|A|A|535
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LMU_021 not in the Motif Atlas
- Geometric match to IL_4V88_415
- Geometric discrepancy: 0.1799
- The information below is about IL_4V88_415
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
5LMU|1|A|G|515
5LMU|1|A|U|516
5LMU|1|A|G|517
5LMU|1|A|C|518
5LMU|1|A|C|519
5LMU|1|A|A|520
5LMU|1|A|G|521
*
5LMU|1|A|C|528
5LMU|1|A|G|529
5LMU|1|A|G|530
5LMU|1|A|U|531
5LMU|1|A|A|532
5LMU|1|A|A|533
5LMU|1|A|U|534
5LMU|1|A|A|535
5LMU|1|A|C|536
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain C
- 30S ribosomal protein S3
- Chain D
- 30S ribosomal protein S4
- Chain L
- 30S ribosomal protein S12
Coloring options: