IL_5LZE_162
3D structure
- PDB id
- 5LZE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GG*UCAUC
- Length
- 7 nucleotides
- Bulged bases
- 5LZE|1|a|C|1200, 5LZE|1|a|A|1201
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZE_162 not in the Motif Atlas
- Homologous match to IL_5J7L_048
- Geometric discrepancy: 0.091
- The information below is about IL_5J7L_048
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_95583.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
5LZE|1|a|G|1057
5LZE|1|a|G|1058
*
5LZE|1|a|U|1199
5LZE|1|a|C|1200
5LZE|1|a|A|1201
5LZE|1|a|U|1202
5LZE|1|a|C|1203
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14
- Chain y
- Selenocysteine transfer RNA
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