IL_5LZS_197
3D structure
- PDB id
- 5LZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- CCACUC*GGAG
- Length
- 10 nucleotides
- Bulged bases
- 5LZS|1|9|G|507
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZS_197 not in the Motif Atlas
- Homologous match to IL_4V88_408
- Geometric discrepancy: 0.123
- The information below is about IL_4V88_408
- Detailed Annotation
- C-loop with extra cWW pair
- Broad Annotation
- C-loop
- Motif group
- IL_11347.2
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
5LZS|1|9|C|491
5LZS|1|9|C|492
5LZS|1|9|A|493
5LZS|1|9|C|494
5LZS|1|9|U|495
5LZS|1|9|C|496
*
5LZS|1|9|G|506
5LZS|1|9|G|507
5LZS|1|9|A|508
5LZS|1|9|G|509
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain EE
- 40S ribosomal protein S4
- Chain JJ
- Ribosomal protein S9 (Predicted)
- Chain YY
- eS24
Coloring options: