IL_5LZT_287
3D structure
- PDB id
- 5LZT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- UGCAUGG*UCUGUGAUG
- Length
- 16 nucleotides
- Bulged bases
- 5LZT|1|9|C|1331, 5LZT|1|9|U|1494, 5LZT|1|9|G|1497
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZT_287 not in the Motif Atlas
- Homologous match to IL_8P9A_439
- Geometric discrepancy: 0.109
- The information below is about IL_8P9A_439
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_86012.1
- Basepair signature
- cWW-tHS-tWH-cWH-cWW-L-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
5LZT|1|9|U|1329
5LZT|1|9|G|1330
5LZT|1|9|C|1331
5LZT|1|9|A|1332
5LZT|1|9|U|1333
5LZT|1|9|G|1334
5LZT|1|9|G|1335
*
5LZT|1|9|U|1492
5LZT|1|9|C|1493
5LZT|1|9|U|1494
5LZT|1|9|G|1495
5LZT|1|9|U|1496
5LZT|1|9|G|1497
5LZT|1|9|A|1498
5LZT|1|9|U|1499
5LZT|1|9|G|1500
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain DD
- uS3
- Chain KK
- eS10
- Chain UU
- uS10
- Chain dd
- uS14
- Chain hh
- mRNA (UGA stop codon)
- Chain ii
- eRF1
Coloring options: