IL_5LZU_222
3D structure
- PDB id
- 5LZU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal termination complex with accommodated eRF1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- GGCC*GAAU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZU_222 not in the Motif Atlas
- Geometric match to IL_4V88_430
- Geometric discrepancy: 0.0859
- The information below is about IL_4V88_430
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
5LZU|1|9|G|928
5LZU|1|9|G|929
5LZU|1|9|C|930
5LZU|1|9|C|931
*
5LZU|1|9|G|1010
5LZU|1|9|A|1011
5LZU|1|9|A|1012
5LZU|1|9|U|1013
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain BB
- 40S ribosomal protein S3a
- Chain NN
- uS15
- Chain bb
- 40S ribosomal protein S27
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