IL_5LZV_058
3D structure
- PDB id
- 5LZV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.35 Å
Loop
- Sequence
- GGG*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 5LZV|1|5|G|1625, 5LZV|1|5|A|1637, 5LZV|1|5|A|1638
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZV_058 not in the Motif Atlas
- Geometric match to IL_5TBW_033
- Geometric discrepancy: 0.1017
- The information below is about IL_5TBW_033
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
5LZV|1|5|G|1624
5LZV|1|5|G|1625
5LZV|1|5|G|1626
*
5LZV|1|5|U|1636
5LZV|1|5|A|1637
5LZV|1|5|A|1638
5LZV|1|5|U|1639
5LZV|1|5|C|1640
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 1
- Nascent chain
- Chain A
- uL2
- Chain N
- eL15
- Chain P
- uL22
- Chain j
- eL37
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