IL_5LZY_263

3D structure

PDB id

5LZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.99 Å

Loop

Sequence

CGAAU*AAAUGUG

Length

12 nucleotides

Bulged bases

5LZY|1|5|G|119, 5LZY|1|5|U|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZY|1|5|C|118
5LZY|1|5|G|119
5LZY|1|5|A|120
5LZY|1|5|A|121
5LZY|1|5|U|122
*
5LZY|1|5|A|147
5LZY|1|5|A|148
5LZY|1|5|A|149
5LZY|1|5|U|150
5LZY|1|5|G|151
5LZY|1|5|U|152
5LZY|1|5|G|153

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 8

5.8S ribosomal RNA; 5.8S rRNA

Chain G

eL8

Chain N

Ribosomal protein L15

Chain h

uL29