IL_5LZZ_197
3D structure
- PDB id
- 5LZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.47 Å
Loop
- Sequence
- CCACUC*GGAG
- Length
- 10 nucleotides
- Bulged bases
- 5LZZ|1|9|G|507
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZZ_197 not in the Motif Atlas
- Homologous match to IL_4V88_408
- Geometric discrepancy: 0.0904
- The information below is about IL_4V88_408
- Detailed Annotation
- C-loop with extra cWW pair
- Broad Annotation
- C-loop
- Motif group
- IL_11347.2
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
5LZZ|1|9|C|491
5LZZ|1|9|C|492
5LZZ|1|9|A|493
5LZZ|1|9|C|494
5LZZ|1|9|U|495
5LZZ|1|9|C|496
*
5LZZ|1|9|G|506
5LZZ|1|9|G|507
5LZZ|1|9|A|508
5LZZ|1|9|G|509
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain EE
- eS4
- Chain JJ
- Ribosomal protein S9 (Predicted)
- Chain YY
- 40S ribosomal protein S24
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