IL_5MMI_034
3D structure
- PDB id
- 5MMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the chloroplast ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CCA*UG
- Length
- 5 nucleotides
- Bulged bases
- 5MMI|1|A|C|1023
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5MMI_034 not in the Motif Atlas
- Homologous match to IL_7RQB_035
- Geometric discrepancy: 0.1098
- The information below is about IL_7RQB_035
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_61258.12
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 40
Unit IDs
5MMI|1|A|C|1022
5MMI|1|A|C|1023
5MMI|1|A|A|1024
*
5MMI|1|A|U|1186
5MMI|1|A|G|1187
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 7
- 50S ribosomal protein 6, chloroplastic
- Chain K
- 50S ribosomal protein L13, chloroplastic
- Chain R
- 50S ribosomal protein L20, chloroplastic
- Chain S
- 50S ribosomal protein L21, chloroplastic
Coloring options: