IL_5MMI_059
3D structure
- PDB id
- 5MMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the chloroplast ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGAG*CAUAC
- Length
- 9 nucleotides
- Bulged bases
- 5MMI|1|A|U|1593
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5MMI_059 not in the Motif Atlas
- Homologous match to IL_5J7L_296
- Geometric discrepancy: 0.337
- The information below is about IL_5J7L_296
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_58112.2
- Basepair signature
- cWW-cWW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
5MMI|1|A|G|1453
5MMI|1|A|G|1454
5MMI|1|A|A|1455
5MMI|1|A|G|1456
*
5MMI|1|A|C|1591
5MMI|1|A|A|1592
5MMI|1|A|U|1593
5MMI|1|A|A|1594
5MMI|1|A|C|1595
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 6
- plastid ribosomal protein cL37, PSRP5
- Chain C
- 50S ribosomal protein L2, chloroplastic
Coloring options: