IL_5MMI_078
3D structure
- PDB id
- 5MMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the chloroplast ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGAAAUUCCUUG*CCCG
- Length
- 16 nucleotides
- Bulged bases
- 5MMI|1|A|A|1952, 5MMI|1|A|U|1958, 5MMI|1|A|C|1977
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5MMI_078 not in the Motif Atlas
- Geometric match to IL_4WF9_077
- Geometric discrepancy: 0.1206
- The information below is about IL_4WF9_077
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_84014.1
- Basepair signature
- cWW-L-R-cHW-cWW-L-L-tSW-L
- Number of instances in this motif group
- 8
Unit IDs
5MMI|1|A|C|1948
5MMI|1|A|G|1949
5MMI|1|A|A|1950
5MMI|1|A|A|1951
5MMI|1|A|A|1952
5MMI|1|A|U|1953
5MMI|1|A|U|1954
5MMI|1|A|C|1955
5MMI|1|A|C|1956
5MMI|1|A|U|1957
5MMI|1|A|U|1958
5MMI|1|A|G|1959
*
5MMI|1|A|C|1975
5MMI|1|A|C|1976
5MMI|1|A|C|1977
5MMI|1|A|G|1978
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2, chloroplastic
Coloring options: