IL_5MMI_101
3D structure
- PDB id
- 5MMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the chloroplast ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUGAG*CAAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- 5MMI|1|A|G|2798
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5MMI_101 not in the Motif Atlas
- Geometric match to IL_7RQB_102
- Geometric discrepancy: 0.0918
- The information below is about IL_7RQB_102
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.1
- Basepair signature
- cWW-tSH-tHW-tHS-cSH-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
5MMI|1|A|U|2653
5MMI|1|A|U|2654
5MMI|1|A|G|2655
5MMI|1|A|A|2656
5MMI|1|A|G|2657
*
5MMI|1|A|C|2792
5MMI|1|A|A|2793
5MMI|1|A|A|2794
5MMI|1|A|G|2795
5MMI|1|A|A|2796
5MMI|1|A|U|2797
5MMI|1|A|G|2798
5MMI|1|A|A|2799
5MMI|1|A|G|2800
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain D
- plastid ribosomal protein uL3c
- Chain K
- 50S ribosomal protein L13, chloroplastic
Coloring options: