IL_5MMI_104
3D structure
- PDB id
- 5MMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the chloroplast ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CCUCU*AAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5MMI_104 not in the Motif Atlas
- Homologous match to IL_7RQB_104
- Geometric discrepancy: 0.1218
- The information below is about IL_7RQB_104
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.6
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 14
Unit IDs
5MMI|1|A|C|2697
5MMI|1|A|C|2698
5MMI|1|A|U|2699
5MMI|1|A|C|2700
5MMI|1|A|U|2701
*
5MMI|1|A|A|2743
5MMI|1|A|A|2744
5MMI|1|A|G|2745
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain D
- plastid ribosomal protein uL3c
- Chain L
- 50S ribosomal protein L14, chloroplastic
- Chain Q
- 50S ribosomal protein L19, chloroplastic
- Chain W
- 4.5S ribosomal RNA
Coloring options: