IL_5MMI_108
3D structure
- PDB id
- 5MMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the chloroplast ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAUAAC*GUAAGC
- Length
- 12 nucleotides
- Bulged bases
- 5MMI|1|A|A|2783
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5MMI_108 not in the Motif Atlas
- Homologous match to IL_5J7L_350
- Geometric discrepancy: 0.2052
- The information below is about IL_5J7L_350
- Detailed Annotation
- UAA/GAN with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_49767.8
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
5MMI|1|A|G|2755
5MMI|1|A|A|2756
5MMI|1|A|U|2757
5MMI|1|A|A|2758
5MMI|1|A|A|2759
5MMI|1|A|C|2760
*
5MMI|1|A|G|2780
5MMI|1|A|U|2781
5MMI|1|A|A|2782
5MMI|1|A|A|2783
5MMI|1|A|G|2784
5MMI|1|A|C|2785
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 5
- 50S ribosomal protein L36, chloroplastic
- Chain D
- plastid ribosomal protein uL3c
- Chain G
- plastid ribosomal protein uL6c
- Chain K
- 50S ribosomal protein L13, chloroplastic
Coloring options: