IL_5MMI_122
3D structure
- PDB id
- 5MMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the chloroplast ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CCAG*UGAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5MMI_122 not in the Motif Atlas
- Homologous match to IL_5J7L_303
- Geometric discrepancy: 0.1833
- The information below is about IL_5J7L_303
- Detailed Annotation
- UAA/GAN variation
- Broad Annotation
- UAA/GAN variation
- Motif group
- IL_23774.1
- Basepair signature
- cWW-L-R-L-tHS-cWW
- Number of instances in this motif group
- 11
Unit IDs
5MMI|1|A|C|1560
5MMI|1|A|C|1561
5MMI|1|A|A|1562
5MMI|1|A|G|1563
*
5MMI|1|A|U|1576
5MMI|1|A|G|1577
5MMI|1|A|A|1578
5MMI|1|A|A|1579
5MMI|1|A|G|1580
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 6
- plastid ribosomal protein cL37, PSRP5
Coloring options: