IL_5MRC_003
3D structure
- PDB id
- 5MRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial ribosome - Class A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.25 Å
Loop
- Sequence
- AUGGAG*UGAAAAU
- Length
- 13 nucleotides
- Bulged bases
- 5MRC|1|A|A|409
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5MRC_003 not in the Motif Atlas
- Geometric match to IL_7A0S_018
- Geometric discrepancy: 0.3114
- The information below is about IL_7A0S_018
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_29495.1
- Basepair signature
- cWW-tSH-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
5MRC|1|A|A|58
5MRC|1|A|U|59
5MRC|1|A|G|60
5MRC|1|A|G|61
5MRC|1|A|A|62
5MRC|1|A|G|63
*
5MRC|1|A|U|407
5MRC|1|A|G|408
5MRC|1|A|A|409
5MRC|1|A|A|410
5MRC|1|A|A|411
5MRC|1|A|A|412
5MRC|1|A|U|413
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain O
- uL22m
- Chain P
- uL23m
- Chain Q
- uL24m
- Chain W
- bL32m
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